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  Berkowitz Group Research Projects
   
  Cholesterol in membranes
   
 

Eukaryotic cellular life has an undeniable dependence on cholesterol. Cholesterolcomprises approximately 40 mol % of the lipid portion of the eukaryotic plasma membrane and is generally responsible for the modulation of the physico-chemical properties required for viability and cell proliferation. It is known that cholesterol reduces the passive permeability of membranes, increases membrane mechanical strength, and modulates membrane enzymes.

Among other biological roles it instigates the formation of membrane "rafts", domains where saturated long-chained lipids, cholesterol and specific proteins are concentrated. Rafts distribute proteins and lipids to organelles and the cell surface, activate immune responses, serve as centers for receptor-mediated signal transduction, and are used by many disease-causing bacteria and viruses as a means to populate host cells. The particular contribution cholesterol makes in the formation of rafts is the allowance for maintaining a liquid-ordered, tightly packed membrane domain. The way in which cholesterol achieves this task, however, is not yet known.

In order to understand the physical properties of biological membranes containing cholesterol-induced liquid-ordered phases, studies have been performed on model systems such as monolayers or giant unilamellar vesicles containing binary or ternary mixtures of phospholipids and cholesterol. Different ideas were proposed to explain creation of lipid rafts in these model systems such as existence of specific complexes between cholesterol and phospholipid or umbrella model where cholesterol is shielded from water by neighboring phospholipid or existence of superlattice of cholesterol in membranes. While it is hard to extract the information on the details of molecular interactions from the experiments, computer simulations can be very useful in gaining such information. We use computer simulation techniques to study the interaction between cholesterol and phospholipids that have different headgroups and different tails. We calculate the difference in the free energy of insertion of cholesterol into different membranes and analyze contributions into this free energy. This should provide us with the measure of affinity of cholesterol to a membrane. We also study the possibility of a complexation between cholesterol and phospholipids and the implications of such a possibility on the properties of membranes.

   
  Protein-Membrane Interactions
   
 

Alzheimer’s Disease is one of the most prevalent diseases in elderly populations throughout the world and is becoming more significant as the average lifespan increases. Therefore, it is of great importance to understand the causes of this disease. It is well known that Alzheimer’s Disease is an aggregation disorder, in which the natively-disordered Amyloid Beta (A-beta) peptide undergoes a conformational change that leads to aggregation of these peptides and the subsequent formation of oligomers, proto-fibrils and fibrils. However, it is unknown exactly what initiates this aggregation and how age factors into the disease.

Experimental evidence shows that one candidate for the cause of aggregation is the interaction of the A-beta peptide with lipids in the cell membrane. It is of great interest to our group to understand what causes this conformational change and what properties of lipids most exacerbate this effect. Because the A-beta peptide aggregates at such low concentrations, it is difficult to achieve natural experimental conditions without inducing aggregation. Therefore, the molecular dynamics simulations performed in our group are ideal for investigating this interaction at a single peptide level. We are currently investigating how the electrostatic properties of the lipids can effect the conformational change of the peptide through the use of conventional molecular dynamics, free energy calculations with umbrella sampling and replica exchange molecular dynamics.

 
 
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Department of Chemistry
Campus Box 3290
Caudill and Kenan Laboratories
The University of North Carolina at Chapel Hill
Chapel Hill, NC 27599-3290 USA
Phone: (919) 843-7100

 

Last Updated: August 23, 2007
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